Protein Structure, Folding and Design
JBB2026H
Graduate students interested in general principles of protein structure, dynamics and interactions, including but not limited to those doing research in protein structure determination, biophysics, dynamics, folding, higher-order association and related fields are strongly encouraged to enroll. Postdoctoral fellows in the same fields are very welcome to attend the lectures. The course emphasizes basic biophysical concepts. The lectures will be geared to both generalists and specialists.
Recent advances have shown how a variety of different protein conformational states, including folded, dynamic, disordered, amyloid, condensed liquid phases, gel, etc., can serve biological function or cause diseases. In response to our increased understanding of the biological importance of all these conformational states, this course has undergone three notable re-organizations in 2012, 2018, and 2020. In addition to our emphasis on the basic knowledge about folded and unfolded structures and coverage of recent advances, notably AlphaFold, in applying machine learning to folded protein structure prediction, we also provide necessary physical concepts for students to understand the multiplicity of conformational states available to proteins as well as the functional relevance of these states.
Course Outline:
Course outline for Fall 2024
Course Next Offered
Fall 2024
Course Time and Location
Start Date: September 6, 2024
End Date: November 29, 2024
Time: 1:00pm – 3:00pm (Note that lecture time is different from previous years')
Day(s) of the Week: Friday’s
Location: MSB 3278
Enrollment Limit
Yes — 30
Method of Student Evaluation
Student presentation (50%); assignments (40%); participation (10%)
Papers Archive
Archive of past papers for student presentations:
2000 2002 2004 2006 2008 2010 2012 2014 2016 2018
2020 2022
Coordinator
Hue Sun Chan
MSB 5207
1 King's College Circle
416-978-2697
chan@arrhenius.med.utoronto.ca
Julie D. Forman-Kay
Molecular Medicine
Hospital for Sick Children
Peter Gilgan Centre for Research and Learning (PGCRL)
Room 20-9713
686 Bay Street
416-813-5358
forman@sickkids.ca
Instructors
Régis Pomès
416-813-5686
pomes@sickkids.ca
Simon Sharpe
416-813-7852
ssharpe@sickkids.ca
Walid A. Houry
416-946-7141
walid.houry@utoronto.ca